I recall that I had used Appfolders Management in the past, however I can't do so anymore.
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get the folders with below command..
gsettings get org.gnome.desktop.app-folders folder-children
Example:
[admin@localhost ~]$ gsettings get org.gnome.desktop.app-folders folder-children
['Utilities', 'YaST']
Remove the 'Utilities'
from the above output with below command..
gsettings set org.gnome.desktop.app-folders folder-children "['YaST']"
Exmple:
[admin@localhost ~]$ gsettings get org.gnome.desktop.app-folders folder-children
['Utilities', 'YaST']
[admin@localhost ~]$ gsettings set org.gnome.desktop.app-folders folder-children "['YaST']"
[admin@localhost ~]$
How to take backup of the Utilities folder before removing it and further reading..

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