To install sra-toolkit, I have to install dependencies such as libxml2, libhdf5, and libmagic. My Linux is Ubuntu Focal 20.04. So, for installing these dependencies I ran below code in terminal:
sudo apt install libhdf5
but I got below message:
Reading package lists... Done
Building dependency tree
Reading state information... Done
E: Unable to locate package libhdf5
I don't know how can I solve this problem? I appreciate if anybody share his/her with me.
The package you are looking for may have a different name. See this question for reference.
You can also search for packages by running:
apt-cache search <package>
In this case for libhdf5 you may want to do:
sudo apt update
sudo apt install hdf5-tools hdf5-helpers
If you need also the development files, add libhdf5-dev to the previous list. If that doesn't work, try with libhdf5-103.
The same applies for libmagic, which for Ubuntu seems to be named libmagic-mgc (and libmagic-dev for the development library).
sudo apt install libhdf5-dev? – robertspierre Dec 22 '20 at 09:30apt policy libhdf5*. – Jos Dec 22 '20 at 09:31