After updating my Ubuntu 16.04 I experienced the same issue. I solved it by removing the /home/your_username/.config/compiz-1/compizconfig
directory:
rm -rf /home/your_username/.config/compiz-1/compizconfig
After which I logged out and in.
The directory originally contained the files:
config
Default.ini
done_upgrades
After removing the directory and logging in and out, it now contains the files:
The done_upgrades
file has not changed and the config
file has changed from:
[general_ubuntu-lowgfx]
backend = ini
profile =
integration = true
plugin_list_autosort = true
to:
[general_ubuntu-lowgfx]
profile = unity-lowgfx
The removed Default.ini
contained:
[core]
s0_outputs = 1488x858+0+0;
So I guess the issue was caused by one of these files, but I know nothing about compiz, so I cannot tell what could have caused it.