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I have installed Ubuntu in UEFI in parallel with my Windows 10.

It's not a major problem. My system easily boots to Ubuntu but whenever I reboot to Windows after Ubuntu, it shows

scanning and repairing the drive: 100% done

(note: Ubuntu is installed on this drive) and it takes longer to boot than from Windows to Windows only.

vilax
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  • Note: Ubuntu 15.10 went End-of-Life in July 2016 (last month). – david6 Aug 20 '16 at 11:13
  • This issue is due to incompatibility in Ubuntu's handling of the 'Windows' formatted drive in question. Each Windows variant updates files/directories is a slightly different manner, and Windows does not expect (or accept) that another OS may have added or changed any files. The same issue occurs for a shared partition between slightly different versions of Windows. You may be able to resolve by doing less changes to the partition (files/folders) under Ubuntu. – david6 Aug 20 '16 at 11:17
  • You should install Ubuntu on a dedicated ext4 partition. Windows doesn't recognize ext partitions, hence no more (unnecessary repairs). – ipse lute Aug 20 '16 at 12:53

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